Dr Kostas Papafitsoros

Kostas Papafitsoros

Lecturer in Mathematical Data Science

School of Mathematical Sciences
Queen Mary University of London
ORCID Google Scholar

Research

Mathematical Imaging, Inverse Problems, Variational Regularisation Methods, Optimisation, Deep Learning, Environmental conservation

Interests

My main research area is mathematical imaging, in the interface of several areas of applied mathematics, like inverse problems, variational methods, calculus of variations, functional analysis, optimisation, optimal control, numerical analysis and deep learning. I have been particularly involved in the design, analysis and application of nonsmooth energy functionals incorporated in variational regularisation methods tailored for image processing. These functionals are at one hand discontinuity-preserving often stemming from their nonsmoothness, that is, they have the ability to preserve sharp edges in the images and on the other hand, they are adaptive to the specific structure of the given data. I am interested in combining these "classical" methods with modern data-driven and deep learning approaches.

I have a second research direction which is the result of my long-term involvement in environmental conservation with special focus on marine turtles, see the corresponding section of my personal website. I consider several applications of animal photo-identification (identification of individual animals via their unique morphological characteristics e.g. patterns/features), and in the same time consider various ways to enhance and automatise this process via modern imaging techniques. I am also looking at mathematical/statistical aspects of citizen science projects related to wildlife conservation.

Publications

solid heart iconPublications of specific relevance to the Centre for Probability, Statistics and Data Science

2024

Relevant PublicationData‐driven methods for quantitative imaging
Dong G, Flaschel M, Hintermüller M, Papafitsoros K, Sirotenko C and Tabelow K
Gamm-Mitteilungen, Wiley 
06-11-2024
Relevant PublicationA Descent Algorithm for the Optimal Control of ReLU Neural Network Informed PDEs Based on Approximate Directional Derivatives
Dong G, Hintermüller M and Papafitsoros K
Siam Journal On Optimization, Society For Industrial & Applied Mathematics (Siam) vol. 34 (3), 2314-2349.  
02-07-2024
Relevant PublicationWildlifeDatasets: An open-source toolkit for animal re-identification
Čermák V, Adam L, Papafitsoros K and Picek L
2024 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV 2024)
01-02-2024
Relevant PublicationSeaTurtleID2022: A long-span dataset for reliable sea turtle re-identification
Adam L, Čermák V, Papafitsoros K and Picek L
2024 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV). vol. 00, 7131-7141.  
08-01-2024

2023

Relevant PublicationLearning Regularization Parameter-Maps for Variational Image Reconstruction Using Deep Neural Networks and Algorithm Unrolling
Kofler A, Altekrüger F, Antarou Ba F, Kolbitsch C, Papoutsellis E, Schote D, Sirotenko C, Zimmermann FF and Papafitsoros K
Siam Journal On Imaging Sciences, Society For Industrial & Applied Mathematics (Siam) vol. 16 (4), 2202-2246.  
29-11-2023

2022

Relevant PublicationA social media-based framework for quantifying temporal changes to wildlife viewing intensity
Papafitsoros K, Adam L and Schofield G
Ecological Modelling, Elsevier vol. 476, 110223-110223.  
29-11-2022
Relevant PublicationBilevel Training Schemes in Imaging for Total Variation--Type Functionals with Convex Integrands
Pagliari V, Papafitsoros K, Raib̧tă B and Vikelis A
Siam Journal On Imaging Sciences, Society For Industrial and Applied Mathematics vol. 15 (4), 1690-1728.  
10-10-2022
Relevant PublicationMore aggressive sea turtles win fights over foraging resources independent of body size and years of presence
Schofield G, Papafitsoros K, Chapman C, Shah A, Westover L, Dickson LCD and Katselidis KA
Animal Behaviour, Elsevier vol. 190, 209-219.  
01-08-2022
Relevant PublicationDualization and Automatic Distributed Parameter Selection of Total Generalized Variation via Bilevel Optimization
Hintermüller M, Papafitsoros K, Rautenberg CN and Sun H
Numerical Functional Analysis and Optimization, Taylor and Francis Group vol. 43 (8), 887-932.  
05-05-2022
Relevant PublicationPhoto-identification confirms polyandry in loggerhead sea turtles
Papafitsoros K, Dimitriadis C, Mazaris AD and Schofield G
Marine Ecology, Wiley 
19-01-2022
Relevant PublicationOptimization with learning-informed differential equation constraints and its applications
Dong G, Hintermüller M and Papafitsoros K
Esaim: Control, Optimisation and Calculus of Variations, Edp Sciences vol. 28 
11-01-2022

2020

Relevant PublicationVariable Step Mollifiers and Applications
Hintermüller M, Papafitsoros K and Rautenberg CN
Integral Equations and Operator Theory, Springer vol. 92 (6) 
30-11-2020
Relevant PublicationSocial media reveals consistently disproportionate tourism pressure on a threatened marine vertebrate
Schofield G
Animal Conservation 
27-10-2020
Relevant PublicationLong‐term photo‐id and satellite tracking reveal sex‐biased survival linked to movements in an endangered species
Schofield G, Klaassen M, Papafitsoros K, Lilley MKS, Katselidis KA and Hays GC
Ecology, Wiley vol. 101 (7) 
30-03-2020
Relevant PublicationPatch-Wise Adaptive Weights Smoothing in R
Polzehl J, Papafitsoros K and Tabelow K
Journal of Statistical Software, Foundation For Open Access Statistic vol. 95 (6) 
01-01-2020

2019

Relevant PublicationAnalysis and automatic parameter selection of a variational model for mixed Gaussian and salt-and-pepper noise removal
Calatroni L and Papafitsoros K
Inverse Problems, Iop Publishing vol. 35 (11) 
23-09-2019
Relevant PublicationChapter 11 Generating structured nonsmooth priors and associated primal-dual methods
Hintermüller M and Papafitsoros K
In Processing, Analyzing and Learning of Images, Shapes, and Forms: Part 2, Elsevier 437-502.  
01-01-2019
Relevant PublicationQuantitative Magnetic Resonance Imaging: From Fingerprinting to Integrated Physics-Based Models
Dong G, Hintermüller M and Papafitsoros K
Siam Journal On Imaging Sciences, Society For Industrial & Applied Mathematics (Siam) vol. 12 (2), 927-971.  
01-01-2019

2018

Relevant PublicationA function space framework for structural total variation regularization with applications in inverse problems
Hintermüller M, Holler M and Papafitsoros K
Inverse Problems, Iop Publishing vol. 34 (6) 
27-04-2018
Relevant PublicationComplex movement patterns by foraging loggerhead sea turtles outside the breeding season identified using Argos-linked Fastloc-Global Positioning System
Dujon AM, Schofield G, Lester RE, Papafitsoros K and Hays GC
Marine Ecology vol. 39 (1), e12489-e12489.  
01-02-2018

2017

Relevant PublicationAnalytical aspects of spatially adapted total variation regularisation
Hintermüller M, Papafitsoros K and Rautenberg CN
Journal of Mathematical Analysis and Applications, Elsevier vol. 454 (2), 891-935.  
01-10-2017
Relevant PublicationAerial and underwater surveys reveal temporal variation in cleaning-station use by sea turtles at a temperate breeding area
Schofield G, Papafitsoros K, Haughey R and Katselidis K
Marine Ecology Progress Series vol. 575, 153-164.  
20-07-2017

2016

Relevant PublicationInfimal Convolution Regularisation Functionals of BV and Lp Spaces
Burger M, Papafitsoros K, Papoutsellis E and Schönlieb C-B
Journal of Mathematical Imaging and Vision, Springer Nature vol. 55 (3), 343-369.  
03-02-2016
Relevant PublicationInfimal Convolution Regularisation Functionals of and Spaces. The Case
Burger M, Papafitsoros K, Papoutsellis E and Schönlieb C-B
IFIP Advances in Information and Communication Technology. vol. 494, 169-179.  
01-01-2016

2015

Relevant PublicationAsymptotic Behaviour of Total Generalised Variation
Papafitsoros K and Valkonen T
Lecture Notes in Computer Science. vol. 9087, 702-714.  
01-01-2015
Relevant PublicationA study of the one dimensional total generalised variation regularisation problem
Papafitsoros K and Bredies K
Inverse Problems and Imaging, American Institute of Mathematical Sciences (Aims) vol. 9 (2), 511-550.  
01-01-2015
Relevant PublicationAnalysis and Application of a Nonlocal Hessian
Lellmann J, Papafitsoros K, Schönlieb C and Spector D
Siam Journal On Imaging Sciences, Society For Industrial & Applied Mathematics (Siam) vol. 8 (4), 2161-2202.  
01-01-2015

2013

Relevant PublicationA Combined First and Second Order Variational Approach for Image Reconstruction
Papafitsoros K and Schönlieb CB
Journal of Mathematical Imaging and Vision, Springer Nature vol. 48 (2), 308-338.  
10-05-2013

2012

Relevant PublicationMachine Learning for Quantitative Magnetic Resonance Image Reconstruction
Kofler A, Zimmermann FF and Papafitsoros K
In Quantification of Biophysical Parameters in Medical Imaging, Springer Nature 171-213.  
24-02-2012