Publications
- Reconstructing the last common ancestor of all eukaryotes.
Richards TA, Eme L, Archibald JM, Leonard G, Coelho SM, de Mendoza A, Dessimoz C, Dolezal P, Fritz-Laylin LK, Gabaldón T, Hampl V, Kops GJPL, Leger MM, Lopez-Garcia P, McInerney JO, Moreira D, Muñoz-Gómez SA, Richter DJ, Ruiz-Trillo I, Santoro AE, et al.
Plos Biology, Public Library of Science (Plos) vol. 22 (11), e3002917-e3002917.
25-11-2024 - Bayesian Selection of Relaxed-Clock Models: Distinguishing between Independent and Autocorrelated Rates
Panchaksaram M, Freitas L and dos Reis M
Systematic Biology, Oxford University Press (Oup)
21-11-2024 - The emergence of Sox and POU transcription factors predates the origins of animal stem cells
Gao Y, Tan DS, Girbig M, Hu H, Zhou X, Xie Q, Yeung SW, Lee KS, Ho SY, Cojocaru V, Yan J, Hochberg GKA, de Mendoza A and Jauch R
Nature Communications, Springer Nature vol. 15 (1)
14-11-2024 - Zebrafish are resilient to the loss of major diacylglycerol acyltransferase enzymes
Wilson MH, Hensley MR, Shen M-C, Lu H-Y, Quinlivan VH, Busch-Nentwich EM, Rawls JF and Farber SA
Journal of Biological Chemistry, Elsevier Bv, 107973-107973.
05-11-2024 - Bayesian Selection of Relaxed-clock Models: Distinguishing Between Independent and Autocorrelated Rates.
Panchaksaram M, Freitas L and Dos Reis M
Systematic Biology
01-11-2024 - Discovery of a neuropeptide that acts as an autotomy-promoting factor
Tinoco A, Kirupakaran V, Capatina D, Egertová M and Elphick M
Current Biology, Cell Press
29-08-2024 - A feather star is born: embryonic development and nervous system organization in the crinoid Antedon mediterranea
Mercurio S, Gattoni G, Scarì G, Ascagni M, Barzaghi B, Elphick MR, Croce JC, Schubert M, Benito-Gutiérrez E and Pennati R
Open Biology, The Royal Society vol. 14 (8), 240115-240115.
21-08-2024 - Annelid methylomes reveal ancestral developmental and aging-associated epigenetic erosion across Bilateria
Guynes K, Sarre LA, Carrillo-Baltodano AM, Davies BE, Xu L, Liang Y, Martín-Zamora FM, Hurd PJ, de Mendoza A and Martín-Durán JM
Genome Biology, Springer Nature vol. 25 (1), 204-204.
01-08-2024 - DNA methylation enables recurrent endogenization of giant viruses in an animal relative
Sarre LA, Kim IV, Ovchinnikov V, Olivetta M, Suga H, Dudin O, Sebé-Pedrós A and de Mendoza A
Science Advances, American Association For The Advancement of Science (Aaas) vol. 10 (28), eado6406-eado6406.
12-07-2024 - Specific DNMT3C flanking sequence preferences facilitate methylation of young murine retrotransposons
Dossmann L, Emperle M, Dukatz M, de Mendoza A, Bashtrykov P and Jeltsch A
Communications Biology, Springer Nature vol. 7 (1)
16-05-2024 - Simultaneous Inference of Past Demography and Selection from the Ancestral Recombination Graph under the Beta Coalescent
Korfmann K, Sellinger TPP, Freund F, Fumagalli M and Tellier A
Peer Community Journal, Peer Community In vol. 4
18-03-2024 - Pla2g12b drives expansion of triglyceride-rich lipoproteins
Thierer JH, Foresti O, Yadav PK, Wilson MH, Moll TOC, Shen M-C, Busch-Nentwich EM, Morash M, Mohlke KL, Rawls JF, Malhotra V, Hussain MM and Farber SA
Nature Communications, Springer Nature vol. 15 (1), 2095-2095.
07-03-2024 - The development of the adult nervous system in the annelid Owenia fusiformis
Carrillo-Baltodano AM, Donnellan RD, Williams EA, Jékely G and Martín-Durán JM
Neural Development, Springer Nature vol. 19 (1)
21-02-2024 - Evolution of chemosensory tissues and cells across ecologically diverse Drosophilids
Bontonou G, Saint-Leandre B, Kafle T, Tess B, Hassan A, Antonio Sánchez-Alcañiz J and Arguello JR
Nature Communications, Nature Research vol. 15 (1047)
05-02-2024 - Neuropeptide expression and action in the reproductive system of the starfish Asterias rubens
Piñon Gonzalez V, Feng Y, Egertová M and Elphick M
The Journal of Comparative Neurology, Wiley
27-01-2024 - Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences
Yu D, Ren Y, Uesaka M, Beavan AJS, Muffato M, Shen J, Li Y, Sato I, Wan W, Clark JW, Keating JN, Carlisle EM, Dearden RP, Giles S, Randle E, Sansom RS, Feuda R, Fleming JF, Sugahara F, Cummins C, et al.
Nature Ecology & Evolution, Springer Nature vol. 8 (3), 519-535.
12-01-2024