Publications
- Investigations into the life history stages of the common frog (Rana temporaria) affected by an amphibian ranavirus in the United Kingdom
Duffus ALJ, Nichols RA and Garner TWJ
Herpetological Review vol. 44 (2), 260-263.
01-12-2013 - Conservation Genetic Resources for Effective Species Survival (ConGRESS): Bridging the divide between conservation research and practice
Hoban S, Arntzen JW, Bertorelle G, Bryja J, Fernandes M, Frith K, Gaggiotti O, Galbusera P, Godoy JA, Hauffe HC, Rus Hoelzel A, Nichols RA, Pérez-Espona S, Primmer C, Russo IRM, Segelbacher G, Siegismund HR, Sihvonen M, Sjögren-Gulve P, Vernesi C, et al.
Journal For Nature Conservation vol. 21 (6), 433-437.
01-12-2013 - Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages
de Mendoza A, Sebé-Pedrós A, Šestak MS, Matejčić M, Torruella G, Domazet-Lošo T and Ruiz-Trillo I
Proceedings of The National Academy of Sciences of The United States of America, Proceedings of The National Academy of Sciences vol. 110 (50), e4858-e4866.
25-11-2013 - Assessing the Effect of Sequencing Depth and Sample Size in Population Genetics Inferences
Fumagalli M
Plos One, Public Library of Science (Plos) vol. 8 (11)
18-11-2013 - Quantifying Population Genetic Differentiation from Next-Generation Sequencing Data
Fumagalli M, Vieira FG, Korneliussen TS, Linderoth T, Huerta-Sánchez E, Albrechtsen A and Nielsen R
Genetics, Oxford University Press (OUP) vol. 195 (3), 979-992.
01-11-2013 - From gonadotropin-inhibitory hormone to SIFamides: are echinoderm SALMFamides the missing link in a bilaterian family of neuropeptides that regulate reproductive processes?
Elphick MR
Gen Comp Endocrinol vol. 193, 229-233.
01-11-2013 - Discovery of a novel neurophysin-associated neuropeptide that triggers cardiac stomach contraction and retraction in starfish.
Semmens DC, Dane RE, Pancholi MR, Slade SE, Scrivens JH and Elphick MR
J Exp Biol vol. 216 (Pt 21), 4047-4053.
01-11-2013 - Deep Sequencing of Viral Genomes Provides Insight into the Evolution and Pathogenesis of Varicella Zoster Virus and Its Vaccine in Humans
Depledge DP, Kundu S, Jensen NJ, Gray ER, Jones M, Steinberg S, Gershon A, Kinchington PR, Schmid DS, Balloux F, Nichols RA and Breuer J
Molecular Biology and Evolution, Oxford University Press (OUP) vol. 31 (2), 397-409.
25-10-2013 - Estimating inbreeding coefficients from NGS data: Impact on genotype calling and allele frequency estimation
Vieira FG, Fumagalli M, Albrechtsen A and Nielsen R
Genome Research, Cold Spring Harbor Laboratory vol. 23 (11), 1852-1861.
15-08-2013 - Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
Orlando L, Ginolhac A, Zhang G, Froese D, Albrechtsen A, Stiller M, Schubert M, Cappellini E, Petersen B, Moltke I, Johnson PLF, Fumagalli M, Vilstrup JT, Raghavan M, Korneliussen T, Malaspinas A-S, Vogt J, Szklarczyk D, Kelstrup CD, Vinther J, et al.
Nature, Springer Nature vol. 499 (7456), 74-78.
26-06-2013 - Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences
Renny-Byfield S, Kovarik A, Kelly LJ, MacAs J, Novak P, Chase MW, Nichols RA, Pancholi MR, Grandbastien MA and Leitch AR
Plant Journal vol. 74 (5), 829-839.
01-06-2013 - Epigenetic mechanisms in development and disease.
Murrell A, Hurd PJ and Wood IC
Biochem Soc Trans vol. 41 (3), 697-699.
01-06-2013 - Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences.
Renny-Byfield S, Kovarik A, Kelly LJ, Macas J, Novak P, Chase MW, Nichols RA, Pancholi MR, Grandbastien M-A and Leitch AR
Plant J vol. 74 (5), 829-839.
01-06-2013 - Inactive or moderately active human promoters are enriched for inter-individual epialleles.
Gemma C, Ramagopalan SV, Down TA, Beyan H, Hawa MI, Holland ML, Hurd PJ, Giovannoni G, Leslie RD, Ebers GC and Rakyan VK
Genome Biol vol. 14 (5)
25-05-2013 - A Scan for Human-Specific Relaxation of Negative Selection Reveals Unexpected Polymorphism in Proteasome Genes
Somel M, Sayres MAW, Jordan G, Huerta-Sanchez E, Fumagalli M, Ferrer-Admetlla A and Nielsen R
Molecular Biology and Evolution, Oxford University Press (OUP) vol. 30 (8), 1808-1815.
22-05-2013 - Godfrey M Hewitt (1940-2013): highlights in Heredity from a career in evolutionary genetics.
Nichols RA, Butlin RK and Bruford MW
Heredity (Edinb) vol. 110 (5), 405-406.
01-05-2013 - Long‐Standing Balancing Selection in the THBS4 Gene: Influence on Sex‐Specific Brain Expression and Gray Matter Volumes in Alzheimer Disease
Cagliani R, Guerini FR, Rubio‐Acero R, Baglio F, Forni D, Agliardi C, Griffanti L, Fumagalli M, Pozzoli U, Riva S, Calabrese E, Sikora M, Casals F, Comi GP, Bresolin N, Cáceres M, Clerici M and Sironi M
Human Mutation, Hindawi vol. 34 (5), 743-753.
02-04-2013 - Crohn's Disease Loci Are Common Targets of Protozoa-Driven Selection
Cagliani R, Pozzoli U, Forni D, Cassinotti A, Fumagalli M, Giani M, Fichera M, Lombardini M, Ardizzone S, Asselta R, de Franchis R, Riva S, Biasin M, Comi GP, Bresolin N, Clerici M and Sironi M
Molecular Biology and Evolution, Oxford University Press (OUP) vol. 30 (5), 1077-1087.
06-02-2013 - Extensive histone post-translational modification in honey bees.
Dickman MJ, Kucharski R, Maleszka R and Hurd PJ
Insect Biochem Mol Biol vol. 43 (2), 125-137.
01-02-2013 - Conservation Genetic Resources for Effective Species Survival (ConGRESS): Bridging the divide between conservation research and practice
Hoban S, Arntzen JW, Bertorelle G, Bryja J, Fernandes M, Frith K, Gaggiotti O, Galbusera P, Godoy JA, Hauffe HC, Rus Hoelzel A, Nichols RA, Pérez-Espona S, Primmer C, Russo I-RM, Segelbacher G, Siegismund HR, Sihvonen M, Sjögren-Gulve P, Vernesi C, et al.
Journal For Nature Conservation
01-01-2013 - The evolution and diversity of SALMFamide neuropeptides
ELPHICK MR, Achhala S and Martynyuk N
Plos One, Plosone vol. 8 (3)
01-01-2013 - The Capsaspora genome reveals a complex unicellular prehistory of animals
Suga H, Chen Z, de Mendoza A, Sebé-Pedrós A, Brown MW, Kramer E, Carr M, Kerner P, Vervoort M, Sánchez-Pons N, Torruella G, Derelle R, Manning G, Lang BF, Russ C, Haas BJ, Roger AJ, Nusbaum C and Ruiz-Trillo I
Nature Communications, Springer Nature vol. 4 (1)
01-01-2013 - Sex-change in Crepidula cf. marginalis (Gastropoda: Calyptraeidae) is a response to physical contact with conspecifics
Carrillo-Baltodano A and Collin R
INTEGRATIVE AND COMPARATIVE BIOLOGY. vol. 53, E259-E259.
01-01-2013 - Sample Planning Optimization Tool for conservation and population Genetics (SPOTG): a software for choosing the appropriate number of markers and samples
Hoban S, Gaggiotti O, Bertorelle G, Arntzen P, Bryja J, Fernandes M, Frith K, Galbusera P, Godoy JA, Hauffe HC, Hoelzel R, Nichols R, Perez-Espona S, Primmer C, Russo I-RM, Segelbacher G, Siegismund HR, Sihvonen M, Sjoegren-Gulve P, Vernesi C, et al.
Methods in Ecology and Evolution vol. 4 (3), 299-303.
01-01-2013 - Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids
Matyasek R, Renny-Byfield S, Fulnecek J, Macas J, Grandbastien M-A, Nichols R, Leitch A and Kovarik A
Bmc Genomics, Biomed Central Ltd vol. 13 (722)
01-01-2013 - Hybridization and speciation
Abbott R, Albach D, Ansell S, Arntzen JW, Baird SJE, Bierne N, Boughman JW, Brelsford A, Buerkle CA, Buggs R, Butlin RK, Dieckmann U, Eroukhmanoff F, Grill A, Cahan SH, Hermansen JS, Hewitt G, Hudson AG, Jiggins C, Jones J, et al.
Journal of Evolutionary Biology vol. 26 (2), 229-246.
01-01-2013 - Bringing genetic diversity to the forefront of conservation policy and management
Hoban SM, Hauffe HC, Perez-Espona S, Arntzen JW, Bertorelle G, Bryja J, Frith K, Gaggiotti OE, Galbusera P, Godoy JA, Hoelzel AR, Nichols RA, Primmer CR, Russo I-R, Segelbacher G, Siegismund HR, Sihvonen M, Vernesi C, Vila C and Bruford MW
Conservation Genetics Resources vol. 5 (2), 593-598.
01-01-2013